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Plankton community in Bongo net (300µm), Tara Oceans cruise

最新版本 發佈 Apr 16, 2021
此資源尚未向GBIF註冊

Tara expeditions sampled the world's oceans with standardized protocols, putting an exceptional effort into sampling plankton diversity across a large size range, using a combination of water samples and net tows. The efforts to explore the genomic diversity of plankton, through metabarcoding and metagenomics, have led to well publicized papers and have made the renown of Tara. While a similar extensive effort has been put on imaging, the datasets are not public yet. In a limited number of stations, in addition to the usual 5µm -> ~5cm Tara sampling strategy, Bongo net samples were taken during the day and during the night, at the same station; this is the content of this dataset. Using a 300µm mesh net, it cover organisms from 300µm to ~3cm more Bongo net (300µm mesh) hauled vertically from 500m depth to the surface, once during the day, and once during the night. Sample preserved in 4% buffered formalin and stored over the long term at the Centre de Collections Planctoniques de Villefranche (CCPv). Sample scanned on a ZooScan, images processed with ZooProcess and sorted taxonomically on EcoTaxa, within the Plateforme d'Imagerie Quantitative de Villefranche (PIQv). The PIQv and CCPv platforms are part of EMBRC-France, a national Research Infrastructure supported by ANR, under the reference ANR-10-INSB-02.

Data Records

The data in this sampling event resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 202 records. 2 extension data tables also exist. An extension record supplies extra information about a core record. The number of records in each extension data table is illustrated below.

  • Event (核心)
    202
  • ExtendedMeasurementOrFact 
    9982
  • Occurrence 
    9376

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

下載

下載最新版本的Darwin Core Archive (DwC-A)資源,或資源元數據的EML或RTF文字檔。

DwC-A資料集 下載 202 紀錄 在 English 中 (165 KB) - Update frequency: 有可能更新,但不確知何時
元數據EML檔 下載 在 English 中 (34 KB)
元數據RTF文字檔 下載 在 English 中 (8 KB)

版本

The table below shows only published versions of the resource that are publicly accessible.

Rights

研究者應尊重以下權利聲明。:

This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License.

GBIF 註冊

此資源尚未向GBIF註冊

關鍵字

Plankton; Imaging; EcoTaxa; Samplingevent

聯絡資訊

資源建立者:

Marc Picheral
Jean-Olivier Irisson
Amanda Elineau
Jean-Baptiste Romagnan
Fabien Lombard
Lars Stemmann
Gaby Gorsky
Laetitia Jalabert
Natalia Llopis Monferrer
Stéphane Pesant
Céline Dimier
Sarah Searson
Stefanie Kandels-Lewis
EMBL DE

可回覆此資源相關問題者:

Fabien Lombard

元數據填寫者:

Jean-Olivier Irisson

地理涵蓋範圍

See coordinates

界定座標範圍 緯度南界 經度西界 [-64.355, -168.348], 緯度北界 經度東界 [79.218, 174.86]

分類群涵蓋範圍

無相關描述

Subkingdom  Harosa
Phylum  Nemertea,  Cyanobacteria,  Mollusca,  Echinodermata,  Ctenophora,  Cnidaria,  Chaetognatha,  Annelida,  Foraminifera,  Bryozoa
Subphylum  Crustacea
Class  Scyphozoa,  Hydrozoa,  Ostracoda,  Cephalopoda,  Bivalvia,  Appendicularia,  Insecta,  Actinopterygii,  Acantharia,  Echinoidea,  Ophiuroidea,  Thaliacea
Subclass  Phaeodaria,  Eumalacostraca,  Copepoda
Superorder  Cladocera
Order  Monstrilloida,  Harpacticoida,  Calanoida,  Pteropoda,  Spumellaria,  Salpida,  Pyrosomatida,  Doliolida,  Actiniaria,  Siphonophorae,  Isopoda,  Cumacea,  Amphipoda,  Euphausiacea,  Mysida
Suborder  Gymnosomata,  Hyperiidea,  Physonectae
Infraorder  Achelata,  Brachyura
Family  Temoridae,  Rhincalanidae,  Pontellidae,  Metridinidae,  Tomopteridae,  Heterorhabdidae,  Euchaetidae,  Eucalanidae,  Phyllodocidae,  Centropagidae,  Candaciidae,  Calanidae,  Acartiidae,  Oithonidae,  Diphyidae,  Sapphirinidae,  Oncaeidae,  Corycaeidae,  Pyrocystaceae,  Abylidae,  Oxycephalidae,  Scinidae,  Phronimidae,  Fritillariidae,  Oikopleuridae,  Gammaridae,  Cliidae,  Cavoliniidae,  Limacinidae,  Creseidae,  Galatheidae,  Hippopodiidae,  Laomediidae,  Penaeidae,  Porcellanidae,  Porpitidae,  Salpidae,  Sergestidae,  Squillidae
Tribe  Alciopini
Genus  Penilia,  Podon,  Evadne,  Diatoma,  Noctiluca,  Copilia,  Lauderia,  Coscinodiscus,  Obelia,  Orbulina,  Aglaura,  Aetideus,  Haloptilus,  Neoceratium,  Lubbockia,  Arietellus,  Pterotrachea,  Atlanta
Species  Hyalocylis striata,  Abylopsis tetragona,  Calocalanus pavo,  Mecynocera clausi,  Pontellina plumata,  Diacavolinia angulata,  Bassia bassensis,  Styliola subula,  Katagnymene spiralis,  Isias clavipes,  Cavolinia inflexa,  Creseis virgula,  Creseis acicula,  Solmundella bitentaculata,  Rhopalonema velatum,  Diacria trispinosa,  Telodiacria quadridentata,  Cymbulia peronii,  Branchiostoma lanceolatum,  Agalma elegans

時間涵蓋範圍

起始日期 / 結束日期 2009-09-07 / 2013-10-27

額外的元數據

維護說明 periodic review of origin data
替代的識別碼 https://ipt.gbif.org/resource?r=dasid_6512